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Crystallography Crystallography Programs Shelx HKL Research, Inc. Sharp SnB Home Page Solve MOSFLM help and guidance Phaser Crystallographic Software BnP Home Page Lafire : an automatic refinement software MOKs RPM Repository Yale CNS BALBES ProtSkin LABELIT http://phillips-lab.biochem.wisc.edu/citations.html Documentation Uppsala Software Factory Tools and Servers ISFI Website SER: New Job Submission Midwest Center for Structural Genomics BioInfoBank Institute - Home Page X-ray Anomalous Scattering Crystal Twinning Server Chemicool Periodic Table Molprobity Rostlab.org PDBsum - A database of the known 3D structures of proteins and nucleic acids Toward Automation of Structure Determination IGS homepage TLS Motion Determination Home Purdue Structure-Group Welcome to TargetDB PSIPRED Protein Structure Prediction Server SER Admin: Admin: Overview Matthews Probability Calculator SER: Batch Job Submission Structure alignment The ConSurf Server This site, the web server, enables the identification of functionally important regions on the surface of the protein or domain, of known three-dimensional structur e, based on the phylogenetic relations of its close homologues. Homologues are automatically collected from the SWISSPROT and TREMBL databases, multiply alligned using CLUSTALW and phylogenetic tree(s) are constructed using PROTPARS. Finally, conservation grades are calculated for each residue in the query sequence based on the phylogenetic tree(s) and mapped on the molyecule by a color-coding scheme onto the Van-der-Waals surface of the protein. TB Structural Genomics Consortium - Home NESG - Northeast Structural Genomics consortium DisMeta - Disorder Prediction MetaSever PSI Structural Genomics Knowledgebase The Protein Structure Initiative Structural Genomics Knowledgebase (PSI SGKB) is designed to turn the products of the Protein Structure Initiative effort into knowledge that is important for understanding living systems and disease. WikiHome - JotSpot Wiki (jcsgwiki) XtalPred Server: Home Prediction of Protein Crystallizability Pfam: Home page Pfam is a large collection of protein families, represented by multiple sequence alignments and hidden Markov models (HMMs) A Hypertext Book of Crystallographic Space Group Diagrams and Tables Bilbao Crystallographic Server Fiser Lab - Albert Einstein College of Medicine Dali server META-DP: Domain Prediction in Proteins Solubility table Solubility table See also: Solubility chart The table below provides information on the variation of solubility of different substances (mostly HIC-Up Theory, Techniques and Teaching Martyn Winn: TLS refinement (IUCr-Crystallographic Education Online) Educational Resources On-Line Brief Teaching Edition of Patterson Peaks Tables X-ray diffraction data collection UVA X-ray lab Crystallization and Heavy Atom Screening Welcome to BR's Macromolecular Crystallography Website XRayView: A Teaching Aid for X-Ray Crystallography Software for Crystallography Interactive guide to diffraction .. Cheshire cells The interactive course of crystallography Crystallization Recipes Rigaku Americas Corporation is a supplier of analytical and industrial instrumentation, including X-ray spectrometry, diffraction and small molecule and protein crystallography. Heavy atom derivatives Preparing A Useful Derivative The Self Rotation Function PDB Links The Protein Data Bank Autodep Input Tool AutoDep - PDB Network Submission Tool Continue AutoDep Crystallographic Data Validation Protein Data Bank in Europe (PDBe) PDBe, Protein Data Bank, PDB, Protein Database Europe, msd, Macromolecular Structure Database Group Argonne Argonne User Registration Argonne Guest House SER-CAT: Southeast Regional Collaborative Access Team APS - ESAF ANL Facility Registration System Enterprise Rent-A-Car: Rental cars at everyday low rates. Rent a car today! Live view - SER-CAT BM Live view - SER-CAT ID Superscreen Manuals The Coot User Manual: Table of Contents FR591 Technical user manual Indonesia Manual MOSFLM 6.2.5 User Guide TOPTOC - PyMolWiki New Mosflm GUI CHTSB: Products & Services JCSG_+_Suite JCSG-Core-I-Suite.pdf (application/pdf Object) Supplies and Ordering Hampton Research MiTeGen - Microtechnologies for Structural Genomics http://store.p212121.com/ Online sales of protein crystallography chemicals, supplies and tools Protein CCD at the NKI

Perl The Perl Monks Guide to the Monastery PerlMeme PERL -- Practical Extraction and Report Language Perl Regular Expressions Regular Expressions in Perl Uploading Files Using CGI and Perl [CGI & Perl Tutorials] Create a file upload facility on your Website, and enable your users to upload content to your Web server. Matt's step-by-step guide gives you the nuts and bolts you need to build your own file uploader. Picking Up Perl - Table of Contents Where and how to start learning Perl The CPAN Search Site - search.cpan.org Beginning Perl for Bioinformatics 0596000804 - Beginning Perl for Bioinformatics - This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to tackle more advanced bioinformatics programming. Main Page - BioPerl Perl Style Guide BigNoseBird.Com's Server Side Include Page ( SSI) BigNoseBird.Com's Server Side Include Page. Learn how to make your pages a lot more interactive CGI Programming 101: Chapter 1: Getting Started ActiveState Tool Corp.: Support: Mailing List Charter ActiveState Tool Corp. (formerly ActiveWare) was founded in 1997 to create Perl solutions on Win32 platforms and to help the freeware community help itself by contributing a wide range of free binary run-time products while developing high-end tools and support for professionals. The Fool's Guide to CGI.pm, the Perl module for CGI scripting Basics at PerlMonks Tutorials ParsePDB.pm – A Perl Parser for PDB Files

Libraries and Journals PubMed VIRGO--The UVA Library (IUCr) Crystallography Journals Online Structure Online University of Virginia Health Sciences Library Acta Cryst via UVA Find Journals Science Podcasts

Other UVA Things Network Registration at U.Va. Homepage Premier.Dell.com - Login The Graphic Identity for the University of Virginia Learn about the University of Virginia's graphic identity, including logo, font and colors. Wireless at U.Va. Wireless is an innovative technology that allows you to make a computer connection to the University network without the physical restrictions of being plugged into a wall outlet. With the wireless LAN (Local Area Network) deployment at U.Va., computing becomes even more portable-- you can make connections for casual computing such as answering email and surfing the Net (small transactions). U.Va. Wireless is not intended for large transactions like downloading MP3 files or watching streaming video. The system is based on the Wi-Fi standard. IP Address Request Form UVaStaffOnly Menu Contracts: Procurement Services Contracts: Procurement Services Mass Spectrometry Mass spectrometry identifies and sequences proteins, identifies phosphorylation sites and compares protein amounts in samples. Genologics LabLink

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Pymol PyMOL Home Page Kristian Rother's Pymol Cameron Mura: PyMOL Introduction to PyMOL Rubor - Die Heimatseite von Kristian Rother Private homepage of Kristian Rother with some bioinformatics Gareth Stockwell's Homepage Color Values - PyMolWiki PyMOL scripts http://davapc1.bioch.dundee.ac.uk/teach/pymol/index.htm eMovie eMovie is a tool that makes the creation of molecular animations and movies both easy and intuitive via a breakthrough storyboard interface. PyMOL scripts PymolRef.pdf (application/pdf Object) Pymol Tricks PyMol Tutorial Molscript MolScript v2.1: Colour names MolScript: The Official Web Site povscript+ Homepage POV-Ray: Documentation POV example Modelling in Povray Povray beginner tutorial: Textures (pigment) TSM - The Shape Machine - Online POV-Ray Rendering Index - Table of Contents, POV-Ray course part 1 Pyvon IM v6 Examples -- Multi-Images Mosaics

Mol Bio ExPASy - Tools Entrez-PubMed blastP -NCBI DNA Sequencing Home Page Dictionary of Cell Biology Kimball's Biology Pages SDSC Biology Workbench American Type Culture Collection (ATCC) GP Codon Usage Database Fisher - Oligo Products Current Protocols in Cell Biology Current Protocols in Molecular Biology Sequence Analysis Resources on the WWW Cell Signaling Technology CST strives to make novel antibodies of the highest possible quality by producing them in-house and rigorously characterizing them with respect to specificity and sensitivity. Production begins with extensive purification (typically by both protein A and peptide affinity chromatography) followed by testing by our staff scientists on a wide range of applications, including ELISA, western blotting, immunoprecipitation, immunocytochemistry, immunohistochemistry and flow cytometry. GENEWIZ - Experience, Precision, and Speed PrimerX Automated design of mutagenic primers for site-directed mutagenesis GENETIC CODE about:webservices [EBI web services] The European Bioinformatics Institute Berkeley Structural Genomics Center: Job Opportunities nesg.swf (application/x-shockwave-flash Object) Structural Genomics Consortium - University of Toronto - University of Oxford SGC - Procotols on the Web Invitrogen Online Ordering Bio-Rad Laboratories Main Page - OpenWetWare Autopublish server not def Thermotoga maritima MSB8 Genome Page BioInformatics | shops Tm Operon Predictions Context-specific BLAST QuikChange® Primer Design Program Rare Codon Calculator

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Automation QIAGEN - Integrated Solutions for the Life Sciences

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Meetings ACA Home Page Positions Developing a Philosophy of Teaching Statement 2007 Protein Structure Initiative "Bottlenecks" Workshop 37th Mid-Atlantic Protein Crystallography Meeting Keystone Symposia Conference | Structural Genomics and its Applications to Chemistry, Biology and Medicine - Program Keystone Symposia, a non-profit organization dedicated to connecting the scientific community for the benefit of society, conducts scientific conferences on biomedical and life science topics in relaxing environments that catalyze information exchange and networking. Meetings are designed to encourage scientists to discuss the newest ideas, discoveries, and technologies with their colleagues in an atmosphere conducive to creative thinking. Symposia locations are usually winter and mountain retreats selected for relaxed environments that optimize information exchange and promote collaborative relationships. NIGMS Protein Structures Initiative "Bottlenecks" Workshop

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Crystallographic Tutorials

Crystallographic Tutorials

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Python PyCogent Cookbook — PyCogent v1.4 documentation

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